REIGL, Tomáš, Veronika NAVRKALOVÁ, Jakub Paweł PORC, Karol PÁL, Kamila STRÁNSKÁ, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. Exploring patterns in clinical, biological, and molecular data of leukemia patients with CLLue. In CEITEC PhD Conference. 2023.
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Original name Exploring patterns in clinical, biological, and molecular data of leukemia patients with CLLue.
Authors REIGL, Tomáš, Veronika NAVRKALOVÁ, Jakub Paweł PORC, Karol PÁL, Kamila STRÁNSKÁ, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ.
Edition CEITEC PhD Conference, 2023.
Other information
Original language English
Type of outcome Konferenční abstrakta
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
WWW URL
Organization Středoevropský technologický institut – Repository – Repository
Keywords in English leukemia; LYmphoid NeXt-Generation Sequencing; LYNX;
Links LM2018140, research and development project. LX22NPO5102, research and development project. NU21-08-00237, research and development project. NU22-08-00227, research and development project.
Changed by Changed by: RNDr. Daniel Jakubík, učo 139797. Changed: 25/3/2024 03:21.
Abstract
High throughput sequencing data analysis of IG/TR rearranged genes in leukemia clinical research', he has been involved in the development of several software projects, e.g.: LYNX (LYmphoid NeXt-Generation Sequencing) analytical software, CLLue, ARResT/Interrogate, ARResT/Subsets aka Encyclopedia of CLL Subsets. LYNX is a tailor-made bioinformatic tool for a new custom-designed capture-based NGS panel. With this tool, a user can analyze molecular markers, such as gene mutations, copy number variations, antigen receptor rearrangements, and translocations in the most common lymphoid malignancies. CLLue is an interactive web-based tool that allows users to perform a visual exploratory data analysis, identification of important and significant features in given groups based on statistical tests, and de novo clustering on their data.
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