J
2024
Distinct interactomes of ADAR1 nuclear and cytoplasmic protein isoforms and their responses to interferon induction
VUKIĆ, Dragana; Anna CHERIAN; Salla KESKITALO; Yih Tyng BONG; Martin MARÔNEK et. al.
Basic information
Original name
Distinct interactomes of ADAR1 nuclear and cytoplasmic protein isoforms and their responses to interferon induction
Authors
VUKIĆ, Dragana (688 Serbia, belonging to the institution); Anna CHERIAN (356 India, belonging to the institution); Salla KESKITALO; Yih Tyng BONG; Martin MARÔNEK (703 Slovakia, belonging to the institution); Leena YADAV; Liam KEEGAN (372 Ireland, belonging to the institution); Markku VARJOSALO and Mary Anne O'CONNELL (372 Ireland, guarantor, belonging to the institution)
Edition
Nucleic Acids Research, Oxford, Oxford University Press, 2024, 0305-1048
Other information
Type of outcome
Article in a journal
Country of publisher
United Kingdom of Great Britain and Northern Ireland
Confidentiality degree
is not subject to a state or trade secret
RIV identification code
RIV/00216224:14740/24:00137921
Organization
Středoevropský technologický institut – Repository – Repository
EID Scopus
2-s2.0-85212956144
Keywords in English
DOUBLE-STRANDED-RNA; EDITING ENZYME ADAR1; LOCALIZATION SIGNAL; BINDING DOMAINS; EXPORT SIGNAL; EXPRESSION; DIMERIZATION; CONJUGATION; DEFICIENCY; REPOSITORY
Links
GA20-11101S, research and development project. GF22-26278K, research and development project. GX21-27329X, research and development project. LM2023050, research and development project. CIISB III, large research infrastructures.
V originále
The RNA editing enzyme adenosine deaminase acting on RNA 1 (ADAR1) is essential for correct functioning of innate immune responses. The ADAR1p110 isoform is mainly nuclear and ADAR1p150, which is interferon (IFN) inducible, is predominately cytoplasmic. Using three different methods – co-immunoprecipitation (co-IP) of endogenous ADAR1, Strep-tag co-IP and BioID with individual ADAR1 isoforms – a comprehensive interactome was generated during both homeostasis and the IFN response. Both known and novel interactors as well as editing regulators were identified. Nuclear proteins were detected as stable interactors with both ADAR1 isoforms. In contrast, BioID identified distinct protein networks for each ADAR1 isoform, with nuclear components observed with ADAR1p110 and components of cytoplasmic cellular condensates with ADAR1p150. RNase A digestion distinguished between distal and proximal interactors, as did a double-stranded RNA (dsRNA)-binding mutant of ADAR1 which demonstrated the importance of dsRNA binding for ADAR1 interactions. IFN treatment did not affect the core ADAR1 interactomes but resulted in novel interactions, the majority of which are proximal interactions retained after RNase A treatment. Short treatment with high molecular weight poly(I:C) during the IFN response resulted in dsRNA-binding-dependent changes in the proximal protein network of ADAR1p110 and association of the ADAR1p150 proximal protein network with some components of antiviral stress granules.
Displayed: 18/7/2025 21:45