Přehled o publikaci
2024
Computational Design of Pore-Forming Peptides with Potent Antimicrobial and Anticancer Activities
DEB, Rahul; Marcelo D. T. TORRES; Miroslav BOUDNÝ; Marketa KOBERSKA; Floriana CAPPIELLO et al.Basic information
Original name
Computational Design of Pore-Forming Peptides with Potent Antimicrobial and Anticancer Activities
Authors
DEB, Rahul; Marcelo D. T. TORRES; Miroslav BOUDNÝ; Marketa KOBERSKA; Floriana CAPPIELLO; Miroslav POPPER; Katerina DVORAKOVA BENDOVA; Martina DRABINOVÁ; Adelheid HANÁČKOVÁ; Katy JEANNOT; Milos PETRIK; Maria Luisa MANGONI; Gabriela BALIKOVA NOVOTNA; Marek MRÁZ; Cesar DE LA FUENTE-NUNEZ and Robert VÁCHA
Edition
Journal of Medicinal Chemistry, Washington, American Chemical Society, 2024, 0022-2623
Other information
Language
English
Type of outcome
Article in a journal
Country of publisher
United States of America
Confidentiality degree
is not subject to a state or trade secret
References:
Marked to be transferred to RIV
Yes
RIV identification code
RIV/00216224:14740/24:00139985
Organization
Středoevropský technologický institut – Repository – Repository
UT WoS
EID Scopus
Keywords in English
STAPHYLOCOCCUS-AUREUS; HISTIDINE-RICH; PH; RESISTANCE; MODELS; MECHANISMS; DISCOVERY; SERINE; FIELD
Links
LM2015085, research and development project. LX22NPO5102, research and development project. LX22NPO5103, research and development project. 101001470, interní kód Repo. CESNET II, large research infrastructures. CIISB II, large research infrastructures. EATRIS-CZ III, large research infrastructures.
Changed: 4/6/2025 00:50, RNDr. Daniel Jakubík
Abstract
In the original language
Peptides that form transmembrane barrel-stave pores are potential alternative therapeutics for bacterial infections and cancer. However, their optimization for clinical translation is hampered by a lack of sequence-function understanding. Recently, we have de novo designed the first synthetic barrel-stave pore-forming antimicrobial peptide with an identified function of all residues. Here, we systematically mutate the peptide to improve pore-forming ability in anticipation of enhanced activity. Using computer simulations, supported by liposome leakage and atomic force microscopy experiments, we find that pore-forming ability, while critical, is not the limiting factor for improving activity in the submicromolar range. Affinity for bacterial and cancer cell membranes needs to be optimized simultaneously. Optimized peptides more effectively killed antibiotic-resistant ESKAPEE bacteria at submicromolar concentrations, showing low cytotoxicity to human cells and skin model. Peptides showed systemic anti-infective activity in a preclinical mouse model of Acinetobacter baumannii infection. We also demonstrate peptide optimization for pH-dependent antimicrobial and anticancer activity.