J 2024

ChOP-CT: quantitative morphometrical analysis of the Hindbrain Choroid Plexus by X-ray micro-computed tomography

PAROBKOVÁ, Viktória; Petra KOMPANÍKOVÁ; Jakub LÁZŇOVSKÝ; Michaela KAVKOVÁ; Marek HAMPL et al.

Basic information

Original name

ChOP-CT: quantitative morphometrical analysis of the Hindbrain Choroid Plexus by X-ray micro-computed tomography

Authors

PAROBKOVÁ, Viktória; Petra KOMPANÍKOVÁ; Jakub LÁZŇOVSKÝ; Michaela KAVKOVÁ; Marek HAMPL; Marcela BUCHTOVÁ; Tomáš ZIKMUND; Jozef KAISER and Vítězslav BRYJA

Edition

Fluids and Barriers of the CNS, BMC, 2024, 2045-8118

Other information

Language

English

Type of outcome

Article in a journal

Country of publisher

United Kingdom of Great Britain and Northern Ireland

Confidentiality degree

is not subject to a state or trade secret

References:

Marked to be transferred to RIV

Yes

RIV identification code

RIV/00216224:14310/24:00135470

Organization

Přírodovědecká fakulta – Repository – Repository

EID Scopus

Keywords in English

3D visualization; Hindbrain choroid plexus; Morphometrics; X-ray micro-computed tomography

Links

GA21-05146S, research and development project. LX22NPO5102, research and development project. Czech-BioImaging III, large research infrastructures. CzechNanoLab II, large research infrastructures.
Changed: 13/6/2025 00:50, RNDr. Daniel Jakubík

Abstract

In the original language

The Hindbrain Choroid Plexus is a complex, cerebrospinal fluid-secreting tissue that projects into the 4th vertebrate brain ventricle. Despite its irreplaceability in the development and homeostasis of the entire central nervous system, the research of Hindbrain Choroid Plexus and other Choroid Plexuses has been neglected by neuroscientists for decades. One of the obstacles is the lack of tools that describe the complex shape of the Hindbrain Choroid Plexus in the context of brain ventricles. Here we introduce an effective tool, termed ChOP-CT, for the noninvasive, X-ray micro-computed tomography-based, three-dimensional visualization and subsequent quantitative spatial morphological analysis of developing mouse Hindbrain Choroid Plexus. ChOP-CT can reliably quantify Hindbrain Choroid Plexus volume, surface area, length, outgrowth angle, the proportion of the ventricular space occupied, asymmetries and general shape alterations in mouse embryos from embryonic day 13.5 onwards. We provide evidence that ChOP-CT is suitable for the unbiased evaluation and detection of the Hindbrain Choroid Plexus alterations within various mutant embryos. We believe, that thanks to its versatility, quantitative nature and the possibility of automation, ChOP-CT will facilitate the analysis of the Hindbrain Choroid Plexus in the mouse models. This will ultimately accelerate the screening of the candidate genes and mechanisms involved in the onset of various Hindbrain Choroid Plexus-related diseases.

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