Přehled o publikaci
2023
Illuminating the mechanism and allosteric behavior of NanoLuc luciferase
NEMERGUT, Michal; Daniel PLUSKAL; Jana HORÁČKOVÁ; Tereza ŠUSTROVÁ; Jan TULIS et al.Basic information
Original name
Illuminating the mechanism and allosteric behavior of NanoLuc luciferase
Authors
NEMERGUT, Michal; Daniel PLUSKAL; Jana HORÁČKOVÁ; Tereza ŠUSTROVÁ; Jan TULIS; Tomáš BÁRTA; Racha BAATALLAH; Glwadys GAGNOT; Veronika NOVÁKOVÁ; Marika MAJEROVÁ; Karolina SEDLÁČKOVÁ; Sérgio Manuel MARQUES; Martin TOUL; Jiří DAMBORSKÝ; Zbyněk PROKOP; David BEDNÁŘ; Yves L. JANIN and Martin MAREK
Edition
Nature Communications, London, Nature Publishing Group, 2023, 2041-1723
Other information
Language
English
Type of outcome
Article in a journal
Country of publisher
Germany
Confidentiality degree
is not subject to a state or trade secret
References:
Marked to be transferred to RIV
Yes
RIV identification code
RIV/00216224:14310/23:00133132
Organization
Přírodovědecká fakulta – Repository – Repository
UT WoS
EID Scopus
Keywords in English
MOLECULAR-DYNAMICS SIMULATIONS; BIOLOGICAL MACROMOLECULES; CRYSTAL-STRUCTURE; BINDING PROTEIN; CDNA CLONING; BIOLUMINESCENCE; COELENTERAMIDE; INTEGRATION; PREDICTION; SUBSTRATE
Links
EF17_043/0009632, research and development project. GA22-09853S, research and development project. LM2018140, research and development project. LM2023069, research and development project. 101087124, interní kód Repo. 857560, interní kód Repo. CIISB II, large research infrastructures.
Changed: 26/2/2025 00:50, RNDr. Daniel Jakubík
Abstract
In the original language
NanoLuc, a superior beta-barrel fold luciferase, was engineered 10 years ago but the nature of its catalysis remains puzzling. Here experimental and computational techniques are combined, revealing that imidazopyrazinone luciferins bind to an intra-barrel catalytic site but also to an allosteric site shaped on the enzyme surface. Structurally, binding to the allosteric site prevents simultaneous binding to the catalytic site, and vice versa, through concerted conformational changes. We demonstrate that restructuration of the allosteric site can boost the luminescent reaction in the remote active site. Mechanistically, an intra-barrel arginine coordinates the imidazopyrazinone component of luciferin, which reacts with O2 via a radical charge-transfer mechanism, and then it also protonates the resulting excited amide product to form a light-emitting neutral species. Concomitantly, an aspartate, supported by two tyrosines, fine-tunes the blue color emitter to secure a high emission intensity. This information is critical to engineering the next-generation of ultrasensitive bioluminescent reporters.